Job title:
Job code: mQt3rvJN - Submitted by Anonymous on 2019-12-06 07:44:51
Sequence name:
NP_619636.2 TRANSMEMBRANE CHANNEL-LIKE PROTEIN 1 [HOMO SAPIENS]
Submitted sequence:
MSPKKVQIKVEEKEDETEESSSEEEEEVEDKLPRRESLRPKRKRTRDVINEDDPEPEPED
EETRKAREKERRRRLKRGAEEEEIDEEELERLKAELDEKRQIIATVKCKPWKMEKKIEVL
KEAKKFVSENEGALGKGKGKRWFAFKMMMAKKWAKFLRDFENFKAACVPWENKIKAIESQ
FGSSVASYFLFLRWMYGVNMVLFILTFSLIMLPEYLWGLPYGSLPRKTVPRAEEASAANF
GVLYDFNGLAQYSVLFYGYYDNKRTIGWMNFRLPLSYFLVGIMCIGYSFLVVLKAMTKNI
GDDGGGDDNTFNFSWKVFTSWDYLIGNPETADNKFNSITMNFKEAITEEKAAQVEENVHL
IRFLRFLANFFVFLTLGGSGYLIFWAVKRSQEFAQQDPDTLGWWEKNEMNMVMSLLGMFC
PTLFDLFAELEDYHPLIALKWLLGRIFALLLGNLYVFILALMDEINNKIEEEKLVKANIT
LWEANMIKAYNASFSENSTGPPFFVHPADVPRGPCWETMVGQEFVRLTVSDVLTTYVTIL
IGDFLRACFVRFCNYCWCWDLEYGYPSYTEFDISGNVLALIFNQGMIWMGSFFAPSLPGI
NILRLHTSMYFQCWAVMCCNVPEARVFKASRSNNFYLGMLLLILFLSTMPVLYMIVSLPP
SFDCGPFSGKNRMFEVIGETLEHDFPSWMAKILRQLSNPGLVIAVILVMVLAIYYLNATA
KGQKAANLDLKKKMKMQALENKMRNKKMAAARAAAAAGRQ
EETRKAREKERRRRLKRGAEEEEIDEEELERLKAELDEKRQIIATVKCKPWKMEKKIEVL
KEAKKFVSENEGALGKGKGKRWFAFKMMMAKKWAKFLRDFENFKAACVPWENKIKAIESQ
FGSSVASYFLFLRWMYGVNMVLFILTFSLIMLPEYLWGLPYGSLPRKTVPRAEEASAANF
GVLYDFNGLAQYSVLFYGYYDNKRTIGWMNFRLPLSYFLVGIMCIGYSFLVVLKAMTKNI
GDDGGGDDNTFNFSWKVFTSWDYLIGNPETADNKFNSITMNFKEAITEEKAAQVEENVHL
IRFLRFLANFFVFLTLGGSGYLIFWAVKRSQEFAQQDPDTLGWWEKNEMNMVMSLLGMFC
PTLFDLFAELEDYHPLIALKWLLGRIFALLLGNLYVFILALMDEINNKIEEEKLVKANIT
LWEANMIKAYNASFSENSTGPPFFVHPADVPRGPCWETMVGQEFVRLTVSDVLTTYVTIL
IGDFLRACFVRFCNYCWCWDLEYGYPSYTEFDISGNVLALIFNQGMIWMGSFFAPSLPGI
NILRLHTSMYFQCWAVMCCNVPEARVFKASRSNNFYLGMLLLILFLSTMPVLYMIVSLPP
SFDCGPFSGKNRMFEVIGETLEHDFPSWMAKILRQLSNPGLVIAVILVMVLAIYYLNATA
KGQKAANLDLKKKMKMQALENKMRNKKMAAARAAAAAGRQ
Prediction status: completed
Prediction summary:
Cell Membrane, 11 Transmembrane helices
Detailed prediction results
Predicted membrane localization (MemLoci): Cell Membrane
Cell membrane score: 94%
Internal membrane score: 29%
Organelle membrane score: 51%
Predicted sequence features:
| Prediction | Presence | Start | End | Detail |
|---|---|---|---|---|
| Signal peptide (SPEP): | NO | - | - | not present |
| Non cytoplasmic region (ENSEMBLE): | - | 1 | 185 | view on sequence |
| Transmembrane region (ENSEMBLE): | YES | 186 | 215 | view on sequence |
| Cytoplasmic region (ENSEMBLE): | - | 216 | 241 | view on sequence |
| Transmembrane region (ENSEMBLE): | YES | 242 | 257 | view on sequence |
| Non cytoplasmic region (ENSEMBLE): | - | 258 | 271 | view on sequence |
| Transmembrane region (ENSEMBLE): | YES | 272 | 295 | view on sequence |
| Cytoplasmic region (ENSEMBLE): | - | 296 | 359 | view on sequence |
| Transmembrane region (ENSEMBLE): | YES | 360 | 388 | view on sequence |
| Non cytoplasmic region (ENSEMBLE): | - | 389 | 405 | view on sequence |
| Transmembrane region (ENSEMBLE): | YES | 406 | 427 | view on sequence |
| Cytoplasmic region (ENSEMBLE): | - | 428 | 438 | view on sequence |
| Transmembrane region (ENSEMBLE): | YES | 439 | 462 | view on sequence |
| Non cytoplasmic region (ENSEMBLE): | - | 463 | 524 | view on sequence |
| Transmembrane region (ENSEMBLE): | YES | 525 | 551 | view on sequence |
| Cytoplasmic region (ENSEMBLE): | - | 552 | 578 | view on sequence |
| Transmembrane region (ENSEMBLE): | YES | 579 | 595 | view on sequence |
| Non cytoplasmic region (ENSEMBLE): | - | 596 | 596 | view on sequence |
| Transmembrane region (ENSEMBLE): | YES | 597 | 615 | view on sequence |
| Cytoplasmic region (ENSEMBLE): | - | 616 | 631 | view on sequence |
| Transmembrane region (ENSEMBLE): | YES | 632 | 657 | view on sequence |
| Non cytoplasmic region (ENSEMBLE): | - | 658 | 691 | view on sequence |
| Transmembrane region (ENSEMBLE): | YES | 692 | 720 | view on sequence |
| Cytoplasmic region (ENSEMBLE): | - | 721 | 760 | view on sequence |
| GPI anchor (PredGPI): | NO | - | - | not present |
Annotation of similar proteins in SwissProt
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