Job title: OLPVRII
Job code: hHAlRBzw - Submitted by Anonymous on 2023-07-25 11:26:30
Sequence name:
TR|F2Y2Z0|F2Y2Z0_9PHYC RHODOPSIN OS=ORGANIC LAKE PHYCODNAVIRUS OX=938083 GN=162286292 PE=1 SV=1
Submitted sequence:
MSDLIEYSFYLTYAFLMTTGTITFIEALRTKNESVRHILNLETCISVVAAFFYSNFIGKL
EHINYEEINLNRYVDWAITTPIMLLVLVLAFRVNQTNKAMVKFSDFMIILGMNYGMLGTG
YLGDIGVIHKTMGTVLGFLFFGGLFYKLNTLRTSNASNDLLYGAFFVLWALYGVFYQMEQ
LPRNVGYNVLDLFSKCFVGIYFWAFYAKIFT
EHINYEEINLNRYVDWAITTPIMLLVLVLAFRVNQTNKAMVKFSDFMIILGMNYGMLGTG
YLGDIGVIHKTMGTVLGFLFFGGLFYKLNTLRTSNASNDLLYGAFFVLWALYGVFYQMEQ
LPRNVGYNVLDLFSKCFVGIYFWAFYAKIFT
Prediction status: completed
Prediction summary:
Internal membranes, 7 Transmembrane helices
Detailed prediction results
Predicted membrane localization (MemLoci): Internal membranes
Cell membrane score: -86%
Internal membrane score: 87%
Organellar membrane score: -50%
Predicted sequence features:
| Prediction | Presence | Start | End | Detail |
|---|---|---|---|---|
| Signal peptide (SPEP): | NO | - | - | not present |
| Non cytoplasmic region (ENSEMBLE): | - | 1 | 5 | view on sequence |
| Transmembrane region (ENSEMBLE): | YES | 6 | 28 | view on sequence |
| Cytoplasmic region (ENSEMBLE): | - | 29 | 37 | view on sequence |
| Transmembrane region (ENSEMBLE): | YES | 38 | 57 | view on sequence |
| Non cytoplasmic region (ENSEMBLE): | - | 58 | 76 | view on sequence |
| Transmembrane region (ENSEMBLE): | YES | 77 | 94 | view on sequence |
| Cytoplasmic region (ENSEMBLE): | - | 95 | 101 | view on sequence |
| Transmembrane region (ENSEMBLE): | YES | 102 | 116 | view on sequence |
| Non cytoplasmic region (ENSEMBLE): | - | 117 | 120 | view on sequence |
| Transmembrane region (ENSEMBLE): | YES | 121 | 147 | view on sequence |
| Cytoplasmic region (ENSEMBLE): | - | 148 | 158 | view on sequence |
| Transmembrane region (ENSEMBLE): | YES | 159 | 177 | view on sequence |
| Non cytoplasmic region (ENSEMBLE): | - | 178 | 188 | view on sequence |
| Transmembrane region (ENSEMBLE): | YES | 189 | 209 | view on sequence |
| Cytoplasmic region (ENSEMBLE): | - | 210 | 211 | view on sequence |
| GPI anchor (PredGPI): | NO | - | - | not present |
Annotation of similar proteins in SwissProt
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