Biocomputing group - University of Bologna

Job title: Dclk1

Job code: cIEGn2CP - Submitted by Anonymous on 2020-11-26 17:56:24

Sequence name:

SP|Q9JLM8|DCLK1_MOUSE SERINE/THREONINE-PROTEIN KINASE DCLK1 OS=MUS MUSCULUS OX=10090 GN=DCLK1 PE=1 SV=1

Submitted sequence:

MSFGRDMELEHFDERDKAQRYSRGSRVNGLPSPTHSAHCSFYRTRTLQTLSSEKKAKKVR
FYRNGDRYFKGIVYAISPDRFRSFEALLADLTRTLSDNVNLPQGVRTIYTIDGLKKISSL
DQLVEGESYVCGSIEPFKKLEYTKNVNPNWSVNVKTTSASRAVSSLATAKGGPSEVRENK
DFIRPKLVTIIRSGVKPRKAVRILLNKKTAHSFEQVLTDITDAIKLDSGVVKRLYTLDGK
QVMCLQDFFGDDDIFIACGPEKFRYQDDFLLDESECRVVKSTSYTKIASASRRGTTKSPG
PSRRSKSPASTSSVNGTPGSQLSTPRSGKSPSPSPTSPGSLRKQRISQHGGSSTSLSSTK
VCSSMDENDGPGEGDELGRRHSLQRGWRREESEEGFQIPATITERYKVGRTIGDGNFAVV
KECIERSTAREYALKIIKKSKCRGKEHMIQNEVSILRRVKHPNIVLLIEEMDVPTELYLV
MELVKGGDLFDAITSTSKYTERDASGMLYNLASAIKYLHSLNIVHRDIKPENLLVYEHQD
GSKSLKLGDFGLATIVDGPLYTVCGTPTYVAPEIIAETGYGLKVDIWAAGVITYILLCGF
PPFRGSGDDQEVLFDQILMGQVDFPSPYWDNVSDSAKELINMMLLVNVDQRFSAVQVLEH
PWVNDDGLPENEHQLSVAGKIKKHFNTGPKPSSTAAGVSVIATTALDKERQVFRRRRNQD
VRSRYKAQPAPPELNSESEDYSPSSSETVRSPNSPF

Prediction status: completed

Prediction summary:

Cell Membrane, 1 Transmembrane helix

Detailed prediction results

Predicted membrane localization (MemLoci): Cell Membrane

Cell membrane score: 79%
Internal membrane score: -66%
Organelle membrane score: 44%

Predicted sequence features:

PredictionPresenceStartEndDetail
Signal peptide (SPEP):NO--not present
Non cytoplasmic region (ENSEMBLE):-1584view on sequence
Transmembrane region (ENSEMBLE):YES585599view on sequence
Cytoplasmic region (ENSEMBLE):-600756view on sequence
GPI anchor (PredGPI):NO--not present

Annotation of similar proteins in SwissProt

loading...