Biocomputing group - University of Bologna

Job title:

Job code: Ul1W7OMq - Submitted by Anonymous on 2020-11-03 10:08:51

Sequence name:

NP_000136.2 FOLLICLE-STIMULATING HORMONE RECEPTOR ISOFORM 1 PRECURSOR [HOMO SAPIENS]

Submitted sequence:

MALLLVSLLAFLSLGSGCHHRICHCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRV
IQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLP
NLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKN
GIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLEN
LKKLRARSTYNLKKLPTLEKLVALMEASLTYPSHCCAFANWRRQISELHPICNKSILRQE
VDYMTQARGQRSSLAEDNESSYSRGFDMTYTEFDYDLCNEVVDVTCSPKPDAFNPCEDIM
GYNILRVLIWFISILAITGNIIVLVILTTSQYKLTVPRFLMCNLAFADLCIGIYLLLIAS
VDIHTKSQYHNYAIDWQTGAGCDAAGFFTVFASELSVYTLTAITLERWHTITHAMQLDCK
VQLRHAASVMVMGWIFAFAAALFPIFGISSYMKVSICLPMDIDSPLSQLYVMSLLVLNVL
AFVVICGCYIHIYLTVRNPNIVSSSSDTRIAKRMAMLIFTDFLCMAPISFFAISASLKVP
LITVSKAKILLVLFHPINSCANPFLYAIFTKNFRRDFFILLSKCGCYEMQAQIYRTETSS
TVHNTHPRNGHCSSAPRVTSGSTYILVPLSHLAQN

Prediction status: completed

Prediction summary:

Cell Membrane, 7 Transmembrane helices

Detailed prediction results

Predicted membrane localization (MemLoci): Cell Membrane

Cell membrane score: 100%
Internal membrane score: -83%
Organellar membrane score: -86%

Predicted sequence features:

PredictionPresenceStartEndDetail
Signal peptide (SPEP):YES117view on sequence
Non cytoplasmic region (ENSEMBLE):-18360view on sequence
Transmembrane region (ENSEMBLE):YES361390view on sequence
Cytoplasmic region (ENSEMBLE):-391397view on sequence
Transmembrane region (ENSEMBLE):YES398420view on sequence
Non cytoplasmic region (ENSEMBLE):-421444view on sequence
Transmembrane region (ENSEMBLE):YES445468view on sequence
Cytoplasmic region (ENSEMBLE):-469483view on sequence
Transmembrane region (ENSEMBLE):YES484504view on sequence
Non cytoplasmic region (ENSEMBLE):-505527view on sequence
Transmembrane region (ENSEMBLE):YES528555view on sequence
Cytoplasmic region (ENSEMBLE):-556570view on sequence
Transmembrane region (ENSEMBLE):YES571594view on sequence
Non cytoplasmic region (ENSEMBLE):-595606view on sequence
Transmembrane region (ENSEMBLE):YES607629view on sequence
Cytoplasmic region (ENSEMBLE):-630695view on sequence
GPI anchor (PredGPI):NO--not present

Annotation of similar proteins in SwissProt

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