Biocomputing group - University of Bologna

Job title:

Job code: RKwCH8X4 - Submitted by Anonymous on 2024-10-14 05:57:55

Sequence name:

NC_014624.2:950237-952924 EUBACTERIUM CALLANDERI, COMPLETE SEQUENCE

Submitted sequence:

ATGGTAAATTTAACAATTGACAATCAGAAAGTGAGCGTTCCCGAGGGCACTACGATCCTT
AACGCCGCTAAAGAAGTAGGGATTGATATCCCGACTTTGTGCTATTTTAAAGGCTTTGAT
CCTGAAGGAAGCTGCAGGATGTGCCTTGTTGAAGTAGTGGGAGCCAGAAGACTGGAGACC
GCTTGTTCAACACCGGTAGGCGAAGGGATGGTCGTCTATACGAATAATGCGGTTGTTCGT
AAAGCGCGCCGCTTTGTCTTAAAAATGCTTTTCTCAGATCATACATTTGATTGCTTTACC
TGCTACAAATTTGGCACCTGCCGTTTTGTTGATCTTAATGGAAATTGTATCGAGTATGAC
GAAGTGAAAAGCTTTGGCCAGTCCTTGGAAAAAGGTCAGCCAATCGATGATTCAAGTCCT
TTTTATACTTATGATCCCAACAAATGTATTTTATGTAATCGTTGCGTTAAGGTTTGTGAA
CACCTTCAGTGCAATCATGTTTTAGCAAAATGCGACCGTGGTTACGAAACAAATATTAAT
CCAGTTTTCGATATGCTGCGCGGCGATAAAAACTCAAACTGTGTAAACTGTGGGAATTGT
ATTGCTGAATGCCCTACAGGTGCACTGGCGCCGAAAAAGTTCATGCCGCTGCCTTATACC
GACACGGTAGAAACAATTTGCCCTTATTGCGGCGTAGGCTGTACTTTGAAATTAAAGGTT
CGGGATAACAAGATTACAGATGTCATGAGTGTTCCGGGCAATGTTAACAATAATCTTCTT
TGTGTTAAGGGGCGCTTTGCCCATGACTTTGTGGCCAGTGAGGATCGTCTGAAAACGCCG
CTTATTCGAAAAAATGGCGTTTTGGAAGAAGCAACCTGGGAAGAAGCTTATGATCTGATT
ACTCAGAAGCTGAAAGAAGCGATTTCAGAAGGCCCGCAGGCTGTTGCAGGTTTTTCGTCA
GCCCGCTGTACCAATGAAGAGAACTATTTATTCCAGAAATTTATTCGATCAGTTGGTAAG
ACGAACAATGTTGACCATTGTGCGCGACTTTGTCATGCCTCTACCGTTGCTGGGCTGGCT
AAATCCTTTGGCAGCGGTGCCATGACAAACAGTATCGAAGAAGTTGACGTGATGGATGTT
ATTCTCGTCAGTGGTTCAAATACCACCGAGACGCATCCGGTCATTGGTGCTAAGATCAAG
CAGCGCGTACAGAAAGGCGCGGCGCTGATCGTGGCGGAACCACGTAAAATTGAACTGGCA
AAATATGCCGATGTTTATCTTCAGATCAAACCAGGCACCAACGTTGCTTTGTTTAATGGT
TTGATGAAAGCAATTCTGGATGAACATCTGGAAGACCGTGATTTTATTAACGAGCGGACT
GAAAATTTCGATACGCTTGAAGAATATTTAAATACAATTACAGTAGAAGAATGCGCTGAG
ATATGTGGTGTAGATCCCGAAGAAATGCGCAAGGCAGCACGTTTATATGCGACTAAGGAT
AAAGGCGGCATCTTCTATTCAATGGGGGTGACCCAGCACGCTACCGGAACCGATGGCGTT
ATGAGTACCGCTAATCTGGCAATGATGACTGGCAAGATTGGACGTGAAGGCTGTGGTGTT
AACCCGCTTCGTGGTCAGAATAACGTTCAGGGAGCCTGTGATATGGGTGCACTTCCAGGC
GATTTTACGGGCTATCAGAAGACGAATAACCCAGATGTTCTTGCCAAATTTGAACAGGCA
TGGGGAACAGAGCTGCCGACAAATGCAGGCCATACGATTACGGAAATTGTTGATGATGTG
GATAAAAACATCGTGAAGTTTTTATATATCATGGGTGAGAATCCGCTGGTTTCTGATCCC
AACACAAATCATGTTAAGGAAGCCTTTGAAAAGGCAAACTTTATCGTACTCCAGGATATT
TTCCTGACTGAAACGTCAGAATATGCAGATGTTGTTCTCCCAGCAATGGTTTATGCTGAA
AAAGACGGCACATTCACCAATACCGAACGCCGGATACAATTGCTTAGAAAAGCCGTGAAG
GCGCCTGGCGTGGCAAAAGAGGACTGGCGAATCATCTGTGAGCTTGCACAGCGTATGGGC
GCTGAAGGCTTTAATTTCAGCAGCTCAGCCGAAATTATGGATGAAATCGCATCGGTCACT
CCGAGCTACGCCGGTGTGTCACACGAGCGTCTGGAACGCGGCGACCGCATTCAGTGGCCA
TGTCCTGACAAAGAATCGGAAGGTACTAAATTCCTGCATAAAGGCCAGTTTACACGCGGA
AAGGGCATGTTTAATGTTGCGCACTATATTGCGCCGGAAGATCAGCCCGATGAAACCTAT
CCGATGATTCTGATGACTGGACGTATTCTGCAGCATTATCATACCCGCACGATGACTAAA
AGAACAGCGGGGATACAGGAGATCGTAGGAGATCCTTTCTTCGAAATTAATCCCAAAACA
GCTGAAGAAAACGGCTTTTCAGAAGGCCAGTTTATTCAGGTAACATCACCAAGAGGCTCT
GTAACTGCAAAAGCAGTCTATAATAAAGGAATTCAGGAAAACACCCTGTTTATGCCATTC
CATTATGGTGACAAGGGTGCCAATTGTCTGACTGGTGGTAAGGTCGATCCAATCGCTAAA
ATTCCACCGTTTAAGGTTTGTAAAGTCTTTTTAGAAGAAGCAAAATAA

Prediction status: completed

Prediction summary:

Cell Membrane, Globular

WARNING: This protein is predicted not to be an integral membrane protein, since it do not contain tranmsmebrane or GPI-anchored domains. The prediction of the localization has to be considered only if other evidences of membrane association are available. For a hint, please have a look at the annotation extracted from similar proteins, as reported below.

Detailed prediction results

Predicted membrane localization (MemLoci): Cell Membrane

Cell membrane score: 64%
Internal membrane score: -38%
Organelle membrane score: 57%

Predicted sequence features:

PredictionPresenceStartEndDetail
Signal peptide (SPEP):NO--not present
Transmembrane region (ENSEMBLE):NO--not present
GPI anchor (PredGPI):NO--not present

Annotation of similar proteins in SwissProt

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