Biocomputing group - University of Bologna

Job title:

Job code: QWh0YaHD - Submitted by Anonymous on 2023-09-25 11:34:12

Sequence name:

HDHCR24

Submitted sequence:

MEPAVSLAVCALLFLLWVRLKGLEFVLIHQRWVFVCLFLLPLSLIFDIYYYVRAWVVFKL
SSAPRLHEQRVRDIQKQVREWKEQGSKTFMCTGRPGWLTVSLRVGKYKKTHKNIMINLMD
ILEVDTKKQIVRVEPLVTMGQVTALLTSIGWTLPVLPELDDLTVGGLIMGTGIESSSHKY
GLFQHICTAYELVLADGSFVRCTPSENSDLFYAVPWSCGTLGFLVAAEIRIIPAKKYVKL
RFEPVRGLEAICAKFTHESQRQENHFVEGLLYSLDEAVIMTGVMTDEAEPSKLNSIGNYY
KPWFFKHVENYLKTNREGLEYIPLRHYYHRHTRSIFWELQDIIPFGNNPIFRYLFGWMVP
PKISLLKLTQGETLRKLYEQHHVVQDMLVPMKCLQQALHTFQNDIHVYPIWLCPFILPSQ
PGLVHPKGNEAELYIDIGAYGEPRVKHFEARSCMRQLEKFVRSVHGFQMLYADCYMNREE
FWEMFDGSLYHKLREKLGCQDAFPEVYDKICKAARH

Prediction status: completed

Prediction summary:

Internal membranes, 2 Transmembrane helices

Detailed prediction results

Predicted membrane localization (MemLoci): Internal membranes

Cell membrane score: -62%
Internal membrane score: 100%
Organellar membrane score: -100%

Predicted sequence features:

PredictionPresenceStartEndDetail
Signal peptide (SPEP):YES122view on sequence
Non cytoplasmic region (ENSEMBLE):-2326view on sequence
Transmembrane region (ENSEMBLE):YES2758view on sequence
Cytoplasmic region (ENSEMBLE):-59208view on sequence
Transmembrane region (ENSEMBLE):YES209229view on sequence
Non cytoplasmic region (ENSEMBLE):-230516view on sequence
GPI anchor (PredGPI):NO--not present

Annotation of similar proteins in SwissProt

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