Biocomputing group - University of Bologna

Job title: 1

Job code: I4g3y8Rm - Submitted by Anonymous on 2024-03-26 06:43:54

Sequence name:

2

Submitted sequence:

MSNLLDGGDLRSPLIPSAVDEYSKPKKVTMDQMFEKYCGEFGWWQLRHFLLTSMAWALEG
IHTMVMIFSDREPGWRCTTSRGCGSTAKSVCELEPGSWEWFGGIGNSTVSEFGLICGQKY
RVGLVQALFFAGCMIGAGVFGHLSDSKLGRKGSLTIVCILNAIFGCLTAFSSDYWTYTLF
RFLSGFSTGGTGLCSFVLATEPVGQSWRGVAGMSTFYFFSTGIASLSAIAYFFQSWRSLY
IASSVPALLFVILILPFLHESPRWFLVRGKVDEAMKIMHKIAISNGKHLPDGVILAVDSE
VNNDDDALHSQSESKLEPDTNEALNGSLLDVLRSPLTRFRLFLAVIINFFVSVVYYGLSL
NAVNLGTNLYVNVALNAMAEMPAYFLTALLLDKLGRKPLAIWTMWFSGAFCLAGSLMKGY
GAWKIIRMVCGVIGIFFMAGTYNLLYVYSMELFPTVVRNAALGCATQASQMGAILAPLVV
VLGGGVPFAVFAACGIAGGLLVIYLPETLNRPLYDTMAGMEEAEAEKPCILA

Prediction status: completed

Prediction summary:

Internal membranes, 12 Transmembrane helices

Detailed prediction results

Predicted membrane localization (MemLoci): Internal membranes

Cell membrane score: 56%
Internal membrane score: 56%
Organelle membrane score: 24%

Predicted sequence features:

PredictionPresenceStartEndDetail
Signal peptide (SPEP):NO--not present
Cytoplasmic region (ENSEMBLE):-145view on sequence
Transmembrane region (ENSEMBLE):YES4668view on sequence
Non cytoplasmic region (ENSEMBLE):-69120view on sequence
Transmembrane region (ENSEMBLE):YES121140view on sequence
Cytoplasmic region (ENSEMBLE):-141151view on sequence
Transmembrane region (ENSEMBLE):YES152170view on sequence
Non cytoplasmic region (ENSEMBLE):-171174view on sequence
Transmembrane region (ENSEMBLE):YES175199view on sequence
Cytoplasmic region (ENSEMBLE):-200209view on sequence
Transmembrane region (ENSEMBLE):YES210231view on sequence
Non cytoplasmic region (ENSEMBLE):-232236view on sequence
Transmembrane region (ENSEMBLE):YES237256view on sequence
Cytoplasmic region (ENSEMBLE):-257336view on sequence
Transmembrane region (ENSEMBLE):YES337359view on sequence
Non cytoplasmic region (ENSEMBLE):-360368view on sequence
Transmembrane region (ENSEMBLE):YES369392view on sequence
Cytoplasmic region (ENSEMBLE):-393398view on sequence
Transmembrane region (ENSEMBLE):YES399417view on sequence
Non cytoplasmic region (ENSEMBLE):-418423view on sequence
Transmembrane region (ENSEMBLE):YES424448view on sequence
Cytoplasmic region (ENSEMBLE):-449459view on sequence
Transmembrane region (ENSEMBLE):YES460482view on sequence
Non cytoplasmic region (ENSEMBLE):-483483view on sequence
Transmembrane region (ENSEMBLE):YES484503view on sequence
Cytoplasmic region (ENSEMBLE):-504532view on sequence
GPI anchor (PredGPI):NO--not present

Annotation of similar proteins in SwissProt

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